After accepting electrons from NDH-2, menaquinol can be reoxidized via two alternative routes, ending with either a cytochrome aa3-type or a cytochrome bd-type terminal oxidase (Fig. 1, for a review, see Cox & Cook, 2007). In the energetically

more efficient route, menaquinol is oxidized by the cytochrome bc1 complex (consisting of subunits QcrA-C), which then transfers the electrons to the terminal cytochrome aa3-type oxidase (CtaC-F) (Matsoso et al., 2005). The cytochrome bc1 complex GS-1101 concentration and the cytochrome aa3 oxidase, thought to form a super complex in mycobacteria, are proton-translocating enzymes, assuring the high energetic yield of this route (Niebisch & Bott, 2003; Matsoso et al., 2005). Alternatively, menaquinol can be directly oxidized by a cytochrome bd-type terminal oxidase (CytA-B) (Kana et al., 2001). This reaction is not coupled to proton pumping; consequently, the cytochrome bd oxidase route is energetically EX 527 manufacturer less efficient. However, cytochrome bd oxidase displays a higher affinity for oxygen and is thus used at low-oxygen tensions (Kana et al., 2001), whereas the cytochrome aa3-type enzyme is the predominant terminal electron acceptor during aerobic growth (Shi et al., 2005).

The energy of the proton motive force is subsequently utilized by ATP synthase for the synthesis of ATP. During dormancy, NDH-2 was found to be upregulated, whereas NDH-1 is strongly downregulated (Schnappinger et al., 2003; Shi et al., 2005). The cytochrome bc1 and cytochrome aa3 complexes are downregulated as well; however, the cytochrome bd-type oxidase is transiently upregulated, arguably to facilitate transition to the dormant state by contributing

to redox balance (Shi et al., 2005). The question of the predominant terminal electron acceptor in the dormant state is still open. It has been suggested that nitrate reductase (NarG-I) acts as an acceptor, and indeed, the enzymatic activity of nitrate Erastin reductase was found to be increased (Wayne & Hayes, 1998), and addition of nitrate increased the viability of dormant mycobacteria (Gengenbacher et al., 2010). Moreover, the nitrate transporter NarK2 is upregulated during dormancy (Schnappinger et al., 2003; Voskuil et al., 2003; Shi et al., 2005). The subunits of the ATP synthase complex were found to be downregulated using in vitro dormancy models as well as an in vivo mouse lung infection model (Shi et al., 2005; Koul et al., 2008). This considerable remodeling in dormant mycobacteria reflects reduced oxygen availability and decreased energy requirements in a state without growth. During dormancy, cellular ATP levels are ∼10-fold lower as compared with replicating bacilli (Starck et al., 2004; Koul et al., 2008; Rao et al., 2008; Gengenbacher et al., 2010). Nevertheless, dormant M. smegmatis are active in respiratory ATP synthesis and maintain an energized membrane (Koul et al., 2008). Furthermore, both replicating and dormant M.